Alignment free sequence comparison (I): statistics and power

Details:

These perl scripts can be used to simulate from the empirical distributions of the D2, D2S and D2* statistics as described in Reinert G., Chew D., Sun FZ., and Waterman M.S. (submitted).

Code:

Source & Readme:

d2-all.zip

 

Please contact us if there are any bugs with our program. 
Copyright © 2009 The University of Southern California. All RIGHTS RESERVED.

Created Date: July 2009
Last Updated Date: 28 July 2009
Contact

 Fengzhu Sun, Ph.D.
 Molecular and Computational Biology Program
 Department of Biological Sciences
 University of Southern California
 Los Angeles, CA, 90089
 (213) 740-2413 (phone)
 (213) 740-2424 (fax)
 Email: fsun AT usc DOT edu