EM-SNP: A Program for Allele Frequency Estimation, SNP Detection and Association Studies Based on Pooled Sequencing Data Using EM Algorithms
This R package is intended to implement a program for allele frequency estimation, SNP detection
and association studies based on pooled sequencing data using EM algorithms.
The details of the methodology as well as the correct citation for this program
are as follows:
Quan Chen and Sun FZ (2013): A unified approach for allele frequency estimation, SNP detection and association studies on pooled sequencing data using EM algorithms. BMC Genomics (APBC2013).
Code and Executables:
Source code and readme files
Please contact us if there are any bugs within our
Copyright © 2012 The University of Southern California. All RIGHTS RESERVED.
Created Date: October 07, 2012
Last Updated Date: October 07, 2012
Molecular and Computational Biology Program
Department of Biological Sciences
University of Southern California
Los Angeles, CA, 90089
(213) 740-2413 (phone)
(213) 740-2424 (fax)
Email: fsun AT usc DOT edu